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by cshaffer
Thu Feb 08, 2007 6:37 pm
Forum: Sequence Improvement Questions
Topic: Fw/Rev inconsistencies, contig orienation
Replies: 11
Views: 27083

very large inconsistent read pairs

Great question! The whole genome assembly from agencourt included reads from quite a few libraries. These include libraries with 3.5 kb inserts (probably about 95% of all clones) as well as 10 kb, fosmid and bac libraries. The version of consed that everyone is using has not been trained to distingu...